| Ident. | Authors (with country if any) | Title |
|---|
| 000021 (2020) |
Zi-Wei Ye [Hong Kong] ; Shuofeng Yuan [Hong Kong] ; Kit-San Yuen [Hong Kong] ; Sin-Yee Fung [Hong Kong] ; Chi-Ping Chan [Hong Kong] ; Dong-Yan Jin [Hong Kong] | Zoonotic origins of human coronaviruses |
| 000539 (2019) |
Chris Durden [États-Unis] ; Seth Sullivant [États-Unis] | Identifiability of Phylogenetic Parameters from k-mer Data Under the Coalescent. |
| 000555 (2019) |
Antonio C. P. Wong ; Xin Li ; Susanna K. P. Lau [Hong Kong] ; Patrick C. Y. Woo [Hong Kong] | Global Epidemiology of Bat Coronaviruses |
| 000578 (2019) |
Jin Il Kim ; Sehee Park ; Joon-Yong Bae ; Man-Seong Park | Evolutionary relationship analysis of Middle East respiratory syndrome coronavirus 4a and 4b protein coding sequences |
| 000646 (2019) |
Cristiano Salata [Italie] ; Arianna Calistri [Italie] ; Cristina Parolin [Italie] ; Giorgio Palù [Italie] | Coronaviruses: a paradigm of new emerging zoonotic diseases. |
| 000681 (2019) |
Arinjay Banerjee ; Kirsten Kulcsar ; Vikram Misra ; Matthew Frieman ; Karen Mossman | Bats and Coronaviruses |
| 000682 (2019) |
Yi Fan [République populaire de Chine] ; Kai Zhao [République populaire de Chine] ; Zheng-Li Shi [République populaire de Chine] ; Peng Zhou [République populaire de Chine] | Bat Coronaviruses in China |
| 000705 (2019) |
Wentian Li [États-Unis] ; Jerome Freudenberg [États-Unis] ; Jan Freudenberg [États-Unis] | Alignment-free approaches for predicting novel Nuclear Mitochondrial Segments (NUMTs) in the human genome. |
| 000834 (2018) |
Susanna K P. Lau [République populaire de Chine] ; Libiao Zhang [République populaire de Chine] ; Hayes K H. Luk [République populaire de Chine] ; Lifeng Xiong [République populaire de Chine] ; Xingwen Peng [République populaire de Chine] ; Kenneth S M. Li [République populaire de Chine] ; Xiangyang He [République populaire de Chine] ; Pyrear Su-Hui Zhao [République populaire de Chine] ; Rachel Y Y. Fan [République populaire de Chine] ; Antonio C P. Wong [République populaire de Chine] ; Syed Shakeel Ahmed [République populaire de Chine] ; Jian-Piao Cai [République populaire de Chine] ; Jasper F W. Chan [République populaire de Chine] ; Yinyan Sun [République populaire de Chine] ; Dongyan Jin [République populaire de Chine] ; Honglin Chen [République populaire de Chine] ; Terrence C K. Lau [République populaire de Chine] ; Raven K H. Kok [République populaire de Chine] ; Wenhui Li [République populaire de Chine] ; Kwok-Yung Yuen [République populaire de Chine] ; Patrick C Y. Woo [République populaire de Chine] | Receptor Usage of a Novel Bat Lineage C Betacoronavirus Reveals Evolution of Middle East Respiratory Syndrome-Related Coronavirus Spike Proteins for Human Dipeptidyl Peptidase 4 Binding |
| 000868 (2018) |
Jie Cui ; Fang Li [États-Unis] ; Zheng-Li Shi | Origin and evolution of pathogenic coronaviruses |
| 000881 (2018) |
Roberta Lecis [Italie] ; Mauro Mucedda [Italie] ; Ermanno Pidinchedda [Italie] ; Marco Pittau [Italie] ; Alberto Alberti [Italie] | Molecular identification of Betacoronavirus in bats from Sardinia (Italy): first detection and phylogeny |
| 000A02 (2018) |
Chu-Ming Luo [République populaire de Chine] ; Ning Wang [République populaire de Chine] ; Xing-Lou Yang [République populaire de Chine] ; Hai-Zhou Liu [République populaire de Chine] ; Wei Zhang [République populaire de Chine] ; Bei Li [République populaire de Chine] ; Ben Hu [République populaire de Chine] ; Cheng Peng [République populaire de Chine] ; Qi-Bin Geng [États-Unis] ; Guang-Jian Zhu [États-Unis] ; Fang Li [États-Unis] ; Zheng-Li Shi [États-Unis] | Discovery of Novel Bat Coronaviruses in South China That Use the Same Receptor as Middle East Respiratory Syndrome Coronavirus. |
| 000B32 (2017) |
Sanzhen Liu [États-Unis] ; Jun Zheng [République populaire de Chine] ; Pierre Migeon [États-Unis] ; Jie Ren [États-Unis] ; Ying Hu [États-Unis] ; Cheng He [République populaire de Chine] ; Hongjun Liu ; Junjie Fu [République populaire de Chine] ; Frank F. White [États-Unis] ; Christopher Toomajian [États-Unis] ; Guoying Wang [République populaire de Chine] | Unbiased K-mer Analysis Reveals Changes in Copy Number of Highly Repetitive Sequences During Maize Domestication and Improvement |
| 000B47 (2017) |
Joseph O. Obameso [République populaire de Chine] ; Hong Li [République populaire de Chine] ; Hao Jia [République populaire de Chine] ; Min Han [République populaire de Chine] ; Shiyan Zhu [République populaire de Chine] ; Canping Huang [République populaire de Chine] ; Yuhui Zhao [République populaire de Chine] ; Min Zhao [République populaire de Chine] ; Yu Bai [République populaire de Chine] ; Fei Yuan [République populaire de Chine] ; Honglan Zhao [République populaire de Chine] ; Xia Peng [République populaire de Chine] ; Wen Xu [République populaire de Chine] ; Wenjie Tan [République populaire de Chine] ; Yingze Zhao [République populaire de Chine] ; Kwok-Yung Yuen [République populaire de Chine] ; William J. Liu [République populaire de Chine] ; Lin Lu [République populaire de Chine] ; George F. Gao [République populaire de Chine] | The persistent prevalence and evolution of cross-family recombinant coronavirus GCCDC1 among a bat population: a two-year follow-up |
| 000B69 (2017) |
Mahmoud Kandeel ; Abdallah Altaher | Synonymous and Biased Codon Usage by MERS CoV Papain-Like and 3CL-Proteases. |
| 000B71 (2017) |
Ying Tao [États-Unis] ; Mang Shi [Australie] ; Christina Chommanard [États-Unis] ; Krista Queen [États-Unis] ; Jing Zhang [États-Unis] ; Wanda Markotter [Afrique du Sud] ; Ivan V. Kuzmin [États-Unis] ; Edward C. Holmes [Australie] ; Suxiang Tong | Surveillance of Bat Coronaviruses in Kenya Identifies Relatives of Human Coronaviruses NL63 and 229E and Their Recombination History. |
| 000B82 (2017) |
Elizabeth S. Allman [États-Unis] ; John A. Rhodes [États-Unis] ; Seth Sullivant [États-Unis] | Statistically Consistent k-mer Methods for Phylogenetic Tree Reconstruction. |
| 000C34 (2017) |
Maxime Déraspe [Canada] ; Frédéric Raymond [Canada] ; Sébastien Boisvert [Canada] ; Alexander Culley [Canada] ; Paul H. Roy [Canada] ; François Laviolette [Canada] ; Jacques Corbeil [Canada] | Phenetic Comparison of Prokaryotic Genomes Using k-mers |
| 000C72 (2017) |
Susanna K. P. Lau [Hong Kong] ; Antonio C. P. Wong ; Terrence C. K. Lau ; Patrick C. Y. Woo [Hong Kong] | Molecular Evolution of MERS Coronavirus: Dromedaries as a Recent Intermediate Host or Long-Time Animal Reservoir? |
| 000D80 (2017) |
S. J. Anthony [États-Unis] ; K. Gilardi [États-Unis] ; V. D. Menachery [États-Unis] ; T. Goldstein [États-Unis] ; B. Ssebide [États-Unis] ; R. Mbabazi [États-Unis] ; I. Navarrete-Macias [États-Unis] ; E. Liang [États-Unis] ; H. Wells [États-Unis] ; A. Hicks [États-Unis] ; A. Petrosov [États-Unis] ; D. K. Byarugaba [Ouganda] ; K. Debbink [États-Unis] ; K. H. Dinnon [États-Unis] ; T. Scobey [États-Unis] ; S. H. Randell [États-Unis] ; B. L. Yount [États-Unis] ; M. Cranfield [États-Unis] ; C. K. Johnson [États-Unis] ; R. S. Baric [États-Unis] ; W. I. Lipkin [États-Unis] ; J. A. K. Mazet [États-Unis] | Further Evidence for Bats as the Evolutionary Source of Middle East Respiratory Syndrome Coronavirus |
| 000D91 (2017) |
Yan Zheng [République populaire de Chine] ; Hong Li [République populaire de Chine] ; Yue Wang [République populaire de Chine] ; Hu Meng [République populaire de Chine] ; Qiang Zhang [République populaire de Chine] ; Xiaoqing Zhao [République populaire de Chine] | Evolutionary mechanism and biological functions of 8-mers containing CG dinucleotide in yeast. |
| 000D92 (2017) |
Mohammad K. Parvez [Arabie saoudite] ; Shama Parveen | Evolution and Emergence of Pathogenic Viruses: Past, Present, and Future. |
| 000E95 (2017) |
Guillaume Bernard [Australie] ; Cheong Xin Chan [Australie] ; Yao-Ban Chan [Australie] ; Xin-Yi Chua [Australie] ; Yingnan Cong [Australie] ; James M. Hogan [Australie] ; Stefan R. Maetschke [Australie] ; Mark A. Ragan [Australie] | Alignment-free inference of hierarchical and reticulate phylogenomic relationships |
| 000F48 (2016) |
Jianlan Zhao ; Shasha Hu ; Hong Luo ; Qi Wu ; Huipeng Yao | [Codon Bias Analysis in the Coding Genes of Structural and Accessory Proteins of Middle East Respiratory Syndrome Coronavirus]. |
| 000F85 (2016) |
Jin Il Kim [Corée du Sud] ; You-Jin Kim ; Philippe Lemey [Belgique] ; Ilseob Lee [Corée du Sud] ; Sehee Park [Corée du Sud] ; Joon-Yong Bae [Corée du Sud] ; Donghwan Kim [Corée du Sud] ; Hyejin Kim [Corée du Sud] ; Seok-Il Jang [Corée du Sud] ; Jeong-Sun Yang ; Hak Kim ; Dae-Won Kim ; Jeong-Gu Nam ; Sung Soon Kim ; Kisoon Kim ; Jae Myun Lee [Corée du Sud] ; Man Ki Song [Corée du Sud] ; Daesub Song [Corée du Sud] ; Jun Chang [Corée du Sud] ; Kee-Jong Hong [Corée du Sud] ; Yong-Soo Bae [Corée du Sud] ; Jin-Won Song [Corée du Sud] ; Joo-Shil Lee [Corée du Sud] ; Man-Seong Park [Corée du Sud] | The recent ancestry of Middle East respiratory syndrome coronavirus in Korea has been shaped by recombination |
| 001069 (2016) |
Susanna K P. Lau [République populaire de Chine] ; Renate Wernery ; Emily Y M. Wong [République populaire de Chine] ; Sunitha Joseph ; Alan K L. Tsang [République populaire de Chine] ; Nissy Annie Georgy Patteril ; Shyna K. Elizabeth ; Kwok-Hung Chan [République populaire de Chine] ; Rubeena Muhammed ; Jöerg Kinne ; Kwok-Yung Yuen [République populaire de Chine] ; Ulrich Wernery ; Patrick C Y. Woo [République populaire de Chine] | Polyphyletic origin of MERS coronaviruses and isolation of a novel clade A strain from dromedary camels in the United Arab Emirates |
| 001106 (2016) |
Diego Forni [Italie] ; Rachele Cagliani [Italie] ; Mario Clerici [Italie] ; Manuela Sironi [Italie] | Molecular Evolution of Human Coronavirus Genomes |
| 001142 (2016) |
Moon-Woo Seong ; So Yeon Kim ; Victor Max Corman ; Taek Soo Kim ; Sung Im Cho ; Man Jin Kim ; Seung Jun Lee ; Jee-Soo Lee ; Soo Hyun Seo ; Ji Soo Ahn ; Byeong Su Yu ; Nare Park ; Myoung-Don Oh ; Wan Beom Park ; Ji Yeon Lee ; Gayeon Kim ; Joon Sung Joh ; Ina Jeong ; Eui Chong Kim ; Christian Drosten ; Sung Sup Park | Microevolution of Outbreak-Associated Middle East Respiratory Syndrome Coronavirus, South Korea, 2015. |
| 001198 (2016) |
Vincenzo Bonnici [Italie] ; Vincenzo Manca [Italie] | Informational laws of genome structures |
| 001213 (2016) |
Xiuyuan Ou [République populaire de Chine] ; Wangliang Zheng [République populaire de Chine] ; Yiwei Shan [République populaire de Chine] ; Zhixia Mu [République populaire de Chine] ; Samuel R. Dominguez [États-Unis] ; Kathryn V. Holmes [États-Unis] ; Zhaohui Qian [Oman] | Identification of the Fusion Peptide-Containing Region in Betacoronavirus Spike Glycoproteins. |
| 001234 (2016) |
Audrey Lacroix [Cambodge] ; Veasna Duong [Cambodge] ; Vibol Hul [Cambodge] ; Sorn San [Cambodge] ; Hull Davun [Cambodge] ; Keo Omaliss [Cambodge] ; Sokha Chea [Cambodge] ; Alexandre Hassanin [France] ; Watthana Theppangna ; Soubanh Silithammavong ; Kongsy Khammavong ; Sinpakone Singhalath ; Zoe Greatorex ; Amanda E. Fine [Viêt Nam] ; Tracey Goldstein [États-Unis] ; Sarah Olson [États-Unis] ; Damien O. Joly [États-Unis, Canada] ; Lucy Keatts [Cambodge] ; Philippe Dussart [Cambodge] ; Aneta Afelt [Pologne] ; Roger Frutos [France] ; Philippe Buchy [Cambodge, Singapour] | Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia |
| 001259 (2016) |
Diego Forni [Italie] ; Rachele Cagliani [Italie] ; Alessandra Mozzi [Italie] ; Uberto Pozzoli [Italie] ; Nasser Al-Daghri [Arabie saoudite] ; Mario Clerici [Italie] ; Manuela Sironi [Italie] | Extensive Positive Selection Drives the Evolution of Nonstructural Proteins in Lineage C Betacoronaviruses. |
| 001265 (2016) |
Zhao Zhang [République populaire de Chine] ; Libing Shen [République populaire de Chine] ; Xun Gu [République populaire de Chine, États-Unis] | Evolutionary Dynamics of MERS-CoV: Potential Recombination, Positive Selection and Transmission |
| 001271 (2016) |
Shuo Su [République populaire de Chine] ; Gary Wong [République populaire de Chine] ; Weifeng Shi [République populaire de Chine] ; Jun Liu [République populaire de Chine] ; Alexander C. K. Lai [États-Unis] ; Jiyong Zhou [République populaire de Chine] ; Wenjun Liu [République populaire de Chine] ; Yuhai Bi [République populaire de Chine] ; George F. Gao [République populaire de Chine] | Epidemiology, Genetic Recombination, and Pathogenesis of Coronaviruses |
| 001365 (2016) |
Jordon Rahaman [États-Unis] ; Jessica Siltberg-Liberles [États-Unis] | Avoiding Regions Symptomatic of Conformational and Functional Flexibility to Identify Antiviral Targets in Current and Future Coronaviruses |
| 001402 (2016) |
Yingnan Cong [Australie] ; Yao-Ban Chan [Australie] ; Mark A. Ragan [Australie] | A novel alignment-free method for detection of lateral genetic transfer based on TF-IDF |
| 001498 (2015) |
Roujian Lu ; Lirong Zou ; Yanqun Wang ; Yanie Zhao ; Weimin Zhou ; Jie Wu ; Wenling Wang ; Guizhen Wu ; Changwen Ke ; Wenjie Tan | [Sequencing and Phylogenetic Analyses of Structural and Accessory Proteins of Middle East Respiratory Syndrome Coronavirus from the First Imported Case in China, 2015]. |
| 001543 (2015) |
Diego Forni [Italie] ; Giulia Filippi [Italie] ; Rachele Cagliani [Italie] ; Luca De Gioia [Italie] ; Uberto Pozzoli [Italie] ; Nasser Al-Daghri ; Mario Clerici [Italie] ; Manuela Sironi [Italie] | The heptad repeat region is a major selection target in MERS-CoV and related coronaviruses |
| 001637 (2015) |
Yanqun Wang [République populaire de Chine] ; Di Liu [République populaire de Chine] ; Weifeng Shi [République populaire de Chine] ; Roujian Lu [République populaire de Chine] ; Wenling Wang [République populaire de Chine] ; Yanjie Zhao [République populaire de Chine] ; Yao Deng [République populaire de Chine] ; Weimin Zhou [République populaire de Chine] ; Hongguang Ren [République populaire de Chine] ; Jun Wu [République populaire de Chine] ; Yu Wang [République populaire de Chine] ; Guizhen Wu [République populaire de Chine] ; George F. Gao [République populaire de Chine] ; Wenjie Tan [République populaire de Chine] | Origin and Possible Genetic Recombination of the Middle East Respiratory Syndrome Coronavirus from the First Imported Case in China: Phylogenetics and Coalescence Analysis |
| 001786 (2015) |
Luis Martinez-Rodriguez [États-Unis] ; Ozgün Erdogan [États-Unis] ; Mariel Jimenez-Rodriguez [États-Unis] ; Katiria Gonzalez-Rivera [États-Unis] ; Tishan Williams [États-Unis] ; Li Li [États-Unis] ; Violetta Weinreb [États-Unis] ; Martha Collier [États-Unis] ; Srinivas Niranj Chandrasekaran [États-Unis] ; Xavier Ambroggio [États-Unis] ; Brian Kuhlman [États-Unis] ; Charles W. Carter [États-Unis] | Functional Class I and II Amino Acid-activating Enzymes Can Be Coded by Opposite Strands of the Same Gene. |
| 001849 (2015) |
Kayla M. Peck ; Christina L. Burch ; Mark T. Heise ; Ralph S. Baric | Coronavirus Host Range Expansion and Middle East Respiratory Syndrome Coronavirus Emergence: Biochemical Mechanisms and Evolutionary Perspectives. |
| 001A74 (2014) |
Christian Pick [Allemagne] ; Samantha Scherbaum ; Elöd Hegedüs ; Andreas Meyer ; Michael Saur ; Ruben Neumann ; Jürgen Markl ; Thorsten Burmester | Structure, diversity and evolution of myriapod hemocyanins. |
| 001A80 (2014) |
Matthew Cotten ; Simon J. Watson ; Alimuddin I. Zumla ; Hatem Q. Makhdoom ; Anne L. Palser ; Swee Hoe Ong ; Abdullah A. Al Rabeeah ; Rafat F. Alhakeem ; Abdullah Assiri ; Jaffar A. Al-Tawfiq ; Ali Albarrak ; Mazin Barry ; Atef Shibl ; Fahad A. Alrabiah ; Sami Hajjar ; Hanan H. Balkhy ; Hesham Flemban ; Andrew Rambaut ; Paul Kellam ; Ziad A. Memish | Spread, Circulation, and Evolution of the Middle East Respiratory Syndrome Coronavirus |
| 001B40 (2014) |
Mark A. Ragan ; Guillaume Bernard ; Cheong Xin Chan | Molecular phylogenetics before sequences |
| 001C09 (2014) |
Jia Wen [Hong Kong] ; Raymond H F. Chan [Hong Kong] ; Shek-Chung Yau [Hong Kong] ; Rong L. He [États-Unis] ; Stephen S T. Yau [République populaire de Chine] | K-mer natural vector and its application to the phylogenetic analysis of genetic sequences. |
| 001E81 (2013) |
David S. Hui [République populaire de Chine] | Tracking the transmission and evolution of MERS-CoV |
| 001F85 (2013) |
Susanna K P. Lau [République populaire de Chine] ; Kenneth S M. Li ; Alan K L. Tsang ; Carol S F. Lam ; Shakeel Ahmed ; Honglin Chen ; Kwok-Hung Chan ; Patrick C Y. Woo ; Kwok-Yung Yuen | Genetic characterization of Betacoronavirus lineage C viruses in bats reveals marked sequence divergence in the spike protein of pipistrellus bat coronavirus HKU5 in Japanese pipistrelle: implications for the origin of the novel Middle East respiratory syndrome coronavirus. |
| 002009 (2013) |
Jan Felix Drexler ; Victor Max Corman ; Christian Drosten | Ecology, evolution and classification of bat coronaviruses in the aftermath of SARS |
| 002033 (2013) |
Heejoon Chae [États-Unis] ; Jinwoo Park [Corée du Sud] ; Seong-Whan Lee [Corée du Sud] ; Kenneth P. Nephew [États-Unis] ; Sun Kim [Corée du Sud] | Comparative analysis using K-mer and K-flank patterns provides evidence for CpG island sequence evolution in mammalian genomes |
| 002036 (2013) |
Ndapewa Laudika Ithete ; Samantha Stoffberg ; Victor Max Corman ; Veronika M. Cottontail ; Leigh Rosanne Richards ; M Corrie Schoeman ; Christian Drosten ; Jan Felix Drexler ; Wolfgang Preiser | Close relative of human Middle East respiratory syndrome coronavirus in bat, South Africa. |
| 002040 (2013) |
Christopher C. Stobart ; Nicole R. Sexton ; Havisha Munjal ; Xiaotao Lu ; Katrina L. Molland ; Sakshi Tomar ; Andrew D. Mesecar ; Mark R. Denison | Chimeric exchange of coronavirus nsp5 proteases (3CLpro) identifies common and divergent regulatory determinants of protease activity. |
